BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G05LP1|AL427664
(1036 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig322 1324 0.0
3x_Contig600 520 e-147
>3x_Contig322
Length = 1586
Score = 1324 bits (657), Expect = 0.0
Identities = 716/737 (97%), Gaps = 6/737 (0%)
Strand = Plus / Plus
Query: 304 atgagatgcttaayacgctccttagggaacttctctaacagcttcactaattgcttagca 363
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atgagatgcttaacacgctccttagggaacttctctaacagcttcactaattgcttagca 61
Query: 364 ctttcttttgttgcttgcgacatctttgttttgtatctgtgctaatatggattgtwacty 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 62 ctttcttttgttgcttgcgacatctttgttttgtatctgtgctaatatggattgtaactc 121
Query: 424 gctagtttagatagagtctttgctggcatgayacaaccgtatctwccgtyagatatgcwa 483
||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| |
Sbjct: 122 gctagtttagatagagtctttgctggcatgacacaaccgtatctaccgtcagatatgcaa 181
Query: 484 accaactttcttgtyattatatcgattcaatccaaaattttcgttttttcttgatgctct 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 accaactttcttgtcattatatcgattcaatccaaaattttcgttttttcttgatgctct 241
Query: 544 aagttagaggatgawattwaaaaawagaaagatctcagaggttcaagtagacttcgcttc 603
|||| ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 242 aagtcagaggatgaaattaaaaaaaagaaagatctcagaggttcaagtagacttcgcttc 301
Query: 604 tagcgacaggtaatttgcatgctacctggagtgccttctctgtagttttgctttgttaca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tagcgacaggtaatttgcatgctacctggagtgccttctctgtagttttgctttgttaca 361
Query: 664 cattattggwatagtaccagatttaatatttaacgtgaaatactttattaatatttaagc 723
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cattattggaatagtaccagatttaatatttaacgtgaaatactttattaatatttaagc 421
Query: 724 ggggattatttacatttcattcatcctcttcgaacggaattgaagcagaagaggagccga 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggggattatttacatttcattcatcctcttcgaacggaattgaagcagaagaggagccga 481
Query: 784 tatttatgtaaacgtttattctgattcagcttgagagttgaatggggccaagtccttggt 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatttatgtaaacgtttattctgattcagcttgagagttgaatggggccaagtccttggt 541
Query: 844 accttcttcccatgaaacaccttgataagtgatttcacggatagccttgatgacgtccgc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 accttcttcccatgaaacaccttgataagtgatttcacggatagccttgatgacgtccgc 601
Query: 904 gacggaacctctgacttgtttggtagagtctctttctctcaaagtgatggaamcatcagt 963
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 602 gacggaacctctgacttgtttggtagagtctctttctctcaaagtgatggaaccatcagt 661
Query: 964 gacggaatc-aaatcaatggtgaca-cgaatggagt-cctaatt-mtcgttacgggc-ta 1018
||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||| ||
Sbjct: 662 gacggaatcaaaatcaatggtgacaccgaatggagtacctaattcatcgttacgggcata 721
Query: 1019 tctctta-cgatagaga 1034
||||||| |||||||||
Sbjct: 722 tctcttaccgatagaga 738
>3x_Contig600
Length = 2338
Score = 520 bits (258), Expect = e-147
Identities = 271/282 (96%)
Strand = Plus / Minus
Query: 14 ctgctggcttgtataatttgtyccctacagcataataattcttatatttatygctcatta 73
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 306 ctgctggcttgtataatttgtcccctacagcataataattcttatatttatcgctcatta 247
Query: 74 tagctttyaacgatcttatctgttcttggatttgagtwtygttgaaatgttcttctggta 133
|||| || ||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 246 tagcattcaacgatcttatctgttcttggatttgagtatcgttgaaatgttcttctggta 187
Query: 134 aagcctcttgaactttctttaatagatytttcttcaaacctaatgggccagawgttctgt 193
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 186 aagcctcttgaactttctttaatagatctttcttcaaacctaatgggccagaagttctgt 127
Query: 194 tgataatatccttaatctctgcwagagaaggcttactttgytcagaggcactacyggttt 253
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||
Sbjct: 126 tgataatatccttaatctctgcaagagaaggcttactttgctcagaggcactaccggttt 67
Query: 254 ctattccggcaactggacggaacctatctagttgtgactctt 295
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ctattccggcaactggacggaacctatctagttgtgactctt 25
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6525
Number of Sequences: 1807
Number of extensions: 6525
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 1036
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1020
effective length of database: 10,329,639
effective search space: 10536231780
effective search space used: 10536231780
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)